基于杜洛克猪肠道代谢组解析剩余采食量社会遗传效应的代谢途径和通路
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四川农业大学动物科技学院

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国家生猪技术创新中心先导科技项目(NCTIP-XD/B01);四川省科技厅项目(2020YFN0024;2021ZDZX0008;2021YFYZ0030);四 川省猪创新团队(sccxtd-2022-08)


Analyzing the Metabolic Pathways and Routes of Social Genetic Effects on Residual Feed Intake Based on the Intestinal Metabolome of Duroc Pigs
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Pilot Science and Technology Project of the National Center of Technology Innovation for Pigs;Project of Sichuan Provincial Department of Science and Technology;Sichuan Pig Innovation Team

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    摘要:

    (目的)旨在从肠道代谢组层面探究与杜洛克猪剩余采食量社会遗传效应关联的关键代谢物与代谢通路,为猪饲料报酬社会遗传效应提供分子层面的解释。(方法)对209头杜洛克猪进行剩余采食量社会遗传效应(Residual feed intake-Social Genetic Effects,RFI-SGE)值估计,选取两端极值个体各10头分为高社会遗传效应组(HRS)与低社会遗传效应组(LRS),采用超高效液相色谱-高分辨质谱(UPLC-Q Exactive)分析20头杜洛克猪回肠和盲代谢物组成,利用PLS-DA等方法筛选回肠与盲肠内HRS组和LRS组的显著差异代谢物,并对显著差异代谢物进行KEGG富集分析,获取差异代谢物参与的主要功能通路。(结果)LC-MS/MS分析结果显示,在回肠与盲肠中分别鉴定出1,111个与590个显著差异代谢物,回肠与盲肠共有γ-氨基丁酸(Gamma-aminobutyric acid,GABA)等13个差异代谢物。KEGG富集分析结果显示,回肠差异代谢物主要富集于丙氨酸、天冬氨酸和谷氨酸代谢、ABC转运蛋白、氨酰-tRNA生物合成等26条通路;盲肠差异代谢物主要富集于色氨酸代谢、不饱和脂肪酸的生物合成、嘌呤代谢等8条通路。(结论)本研究通过肠道代谢组学分析发现杜洛克猪剩余采食量社会遗传效应与肠道差异代谢物(GABA)及关键代谢通路(如氨基酸代谢、色氨酸代谢)显著相关,为解析饲料报酬的社会遗传代谢途径提供了新的视角。

    Abstract:

    (Objective:)This study aimed to explore key metabolites and metabolic pathways associated with the social genetic effects (SGE) of residual feed intake (RFI) in Duroc pigs at the intestinal metabolome level, providing a molecular-level explanation for the social genetic effects of feed efficiency.(Methods)The RFI-SGE values of 209 Duroc pigs were estimated, and 20 extreme individuals (10 highest and 10 lowest) were selected and divided into a high social genetic effect group (HRS) and a low social genetic effect group (LRS). Ultra-high-performance liquid chromatography coupled with high-resolution mass spectrometry (UPLC-Q Exactive) was employed to analyze the metabolomic profiles of ileal and cecal contents. Partial least squares-discriminant analysis (PLS-DA) was used to identify significant differential metabolites between HRS and LRS groups in the ileum and cecum. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis was performed to elucidate the major functional pathways involving these metabolites.(Results)LC-MS/MS analysis revealed 1,111 and 590 significantly differential metabolites in the ileum and cecum, respectively. Thirteen shared metabolites, including gamma-aminobutyric acid (GABA), were identified in both intestinal segments. KEGG enrichment analysis showed that ileal differential metabolites were primarily enriched in 26 pathways, such as alanine, aspartate, and glutamate metabolism; ABC transporters; and aminoacyl-tRNA biosynthesis. Cecal differential metabolites were mainly associated with 8 pathways, including tryptophan metabolism, biosynthesis of unsaturated fatty acids, and purine metabolism.(Conclusion)This intestinal metabolomics study demonstrated that the social genetic effects of RFI in Duroc pigs are significantly correlated with differential metabolites (e.g., GABA) and key metabolic pathways (e.g., amino acid metabolism, tryptophan metabolism). These findings offer novel insights into the metabolic mechanisms underlying the social genetic effects of feed efficiency.

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  • 收稿日期:2025-04-27
  • 最后修改日期:2025-06-13
  • 录用日期:2025-11-11
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